GenomeComb
cg genepredtsv2fasta ?options? ?gene_tsv? ?fastafile?
Extracts transcript sequences based on a transcript tsv file (format_transcript) and stores them in a fasta file.
genepredtsv2fasta takes a tsv file (with fields as described in format_transcript) and extracts the sequences of the transcripts in the file from the reference sequence (which must be given using -refseq path) and stores them in fasta format in the result file.
Format Conversion